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BaseInfo

ncRNA ID novel_bna_miR1054
Species Brassica napus
Class miRNA
Genome position ChrA3:42552267-42552403 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 24
Mature sequence(if miRNA) 114 - AACUCUUUAUGUUCGUCGGCAUUU - 137
Stem-loop(if miRNA) --AAC                C            A  U       A           UU         A
     UCUUUAUGUUCGUCGG AUUUCCUCGGAA AU CCGAGGA AUUCCGAGGAA  GGGGAUUUG U
     |||||||||||||||| |||||||||||| || ||||||| |||||||||||  |||||||||
     AGGAAUACAAGCAGCC UAAAGGAGCCUU UA GGCUCCU UAAGGCUCCUU  UUCUUAGAU U
CCUUU                A            A  U       C           -U         A
Stem-loop sequence AACUCUUUAUGUUCGUCGGCAUUUCCUCGGAAAAUUCCGAGGAAAUUCCGAGGAAUUGGGGAUUUGAUUAUAGAUUCUUUUUCCUCGGAAUCUCCUCGGUAUAUUCCGAGGAAAUACCGACGAACAUAAGGAUUUCC