ncRNA ID | novel_bna_miR1054 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA3:42552267-42552403 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 114 - AACUCUUUAUGUUCGUCGGCAUUU - 137 |
Stem-loop(if miRNA) |
--AAC                C            A  U       A           UU         A      UCUUUAUGUUCGUCGG AUUUCCUCGGAA AU CCGAGGA AUUCCGAGGAA  GGGGAUUUG U      |||||||||||||||| |||||||||||| || ||||||| |||||||||||  |||||||||      AGGAAUACAAGCAGCC UAAAGGAGCCUU UA GGCUCCU UAAGGCUCCUU  UUCUUAGAU U CCUUU                A            A  U       C           -U         A |
Stem-loop sequence | AACUCUUUAUGUUCGUCGGCAUUUCCUCGGAAAAUUCCGAGGAAAUUCCGAGGAAUUGGGGAUUUGAUUAUAGAUUCUUUUUCCUCGGAAUCUCCUCGGUAUAUUCCGAGGAAAUACCGACGAACAUAAGGAUUUCC |