ncRNA ID | novel_bna_miR1051 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA3:35196007-35196091 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496;SRR1363495 |
Length | 23 |
Mature sequence(if miRNA) | 63 - CAUUCAGAUGGAUCAUCCGGAUA - 85 |
Stem-loop(if miRNA) |
--      C  G             AA  AG       UU   U   UCUGGA GA CCAUCUGGAUGAA  UG  AUUUUUG  UGU U   |||||| || |||||||||||||  ||  |||||||  |||   AGGCCU CU GGUAGACUUACUU  AC  UGAAAAU  ACA A AU      A  A             -A  -G       -C   G |
Stem-loop sequence | UCUGGACGAGCCAUCUGGAUGAAAAUGAGAUUUUUGUUUGUUUAGACACUAAAAGUGCAAUUCAUUCAGAUGGAUCAUCCGGAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013849767.1 |
|
2.5 | PREDICTED: Brassica napus uncharacterized LOC106409084 (LOC106409084), mRNA | uncharacterized LOC106409084(LOC106409084) | coding protein | psRNATarget |