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BaseInfo

ncRNA ID	novel_bna_miR1050
Species	Brassica napus
Class	miRNA
Genome position	ChrA3:30524203-30524283 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363496;SRR1363495
Length	21
Mature sequence(if miRNA)	1 - AGACUCUCGGAAGACUUCUUA - 21
Stem-loop(if miRNA)	--     C  G         UUA     -       AU      AGACU UC GAAGACUUC   GGAAA UCUUCUA  GUAU   ||||| || |||||||||   ||||| |||||||  |||U   UCUGA AG CUUCUGAAG   CCUUU AGAAGAU  UAUU AU     A  A         -CA     C       CG
Stem-loop sequence	AGACUCUCGGAAGACUUCUUAGGAAAUCUUCUAAUGUAUUUUAUGCUAGAAGACUUUCCACGAAGUCUUCAGAAAGUCUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013792888.1	ncRNA:21   AUUCUUCAGAAGGCUC-UCAGA   1   *=||||||||||||||-||||| targets:1840   GGAGAAGUCUUCCGAGGAGUCU   1861 Target Full Sequence	3.0	PREDICTED: Brassica napus serine/threonine-protein kinase EDR1-like (LOC106353181), transcript variant X2, mRNA	serine/threonine-protein kinase EDR1-like(LOC106353181)	coding protein	psRNATarget
XM_013868957.1	ncRNA:21   AUUCUUCAGAAGGCUC-UCAGA   1   *=||||||||||||||-||||| targets:1881   GGAGAAGUCUUCCGAGGAGUCU   1902 Target Full Sequence	3.0	PREDICTED: Brassica napus serine/threonine-protein kinase EDR1-like (LOC106428201), mRNA	serine/threonine-protein kinase EDR1-like(LOC106428201)	coding protein	psRNATarget
XM_013792887.1	ncRNA:21   AUUCUUCAGAAGGCUC-UCAGA   1   *=||||||||||||||-||||| targets:1997   GGAGAAGUCUUCCGAGGAGUCU   2018 Target Full Sequence	3.0	PREDICTED: Brassica napus serine/threonine-protein kinase EDR1-like (LOC106353181), transcript variant X1, mRNA	serine/threonine-protein kinase EDR1-like(LOC106353181)	coding protein	psRNATarget