ncRNA ID | novel_bna_miR1049 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA3:26262251-26262429 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 156 - AAUAUGGAGUGUGGUUGGAGAUGC - 179 |
Stem-loop(if miRNA) |
--          C         G           A    -    ----            UAAAAU    UAAUGACC              AG   A   AUCUCCAACC UACUCCAUA UUUACUCCAAA UUGA AAAA    AAAAAUAGAGUG      GAAG        AAAAAAUAAAAGCA  ACU U   |||||||||| ||||||||| ||||||||||| |||| ||||    ||||||||||||      ||||        ||||||||||||||  |||   UAGAGGUUGG GUGAGGUAU AAAUGAGGUUU AACU UUUU    UUUUUAUCUCGC      CUUU        UUUUUUAUUUUUGU  UGA A CG          U         A           A    C    ACAC            ----UU    --------              AA   G |
Stem-loop sequence | AUCUCCAACCCUACUCCAUAGUUUACUCCAAAAUUGAAAAAAAAAAUAGAGUGUAAAAUGAAGUAAUGACCAAAAAAUAAAAGCAAGACUAUAGAGUAAUGUUUUUAUUUUUUUUUCUUCGCUCUAUUUUUCACAUUUUCUCAAAUUUGGAGUAAAAUAUGGAGUGUGGUUGGAGAUGC |