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BaseInfo

ncRNA ID novel_bna_miR1049
Species Brassica napus
Class miRNA
Genome position ChrA3:26262251-26262429 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 24
Mature sequence(if miRNA) 156 - AAUAUGGAGUGUGGUUGGAGAUGC - 179
Stem-loop(if miRNA) --          C         G           A    -    ----            UAAAAU    UAAUGACC              AG   A
  AUCUCCAACC UACUCCAUA UUUACUCCAAA UUGA AAAA    AAAAAUAGAGUG      GAAG        AAAAAAUAAAAGCA  ACU U
  |||||||||| ||||||||| ||||||||||| |||| ||||    ||||||||||||      ||||        ||||||||||||||  |||
  UAGAGGUUGG GUGAGGUAU AAAUGAGGUUU AACU UUUU    UUUUUAUCUCGC      CUUU        UUUUUUAUUUUUGU  UGA A
CG          U         A           A    C    ACAC            ----UU    --------              AA   G
Stem-loop sequence AUCUCCAACCCUACUCCAUAGUUUACUCCAAAAUUGAAAAAAAAAAUAGAGUGUAAAAUGAAGUAAUGACCAAAAAAUAAAAGCAAGACUAUAGAGUAAUGUUUUUAUUUUUUUUUCUUCGCUCUAUUUUUCACAUUUUCUCAAAUUUGGAGUAAAAUAUGGAGUGUGGUUGGAGAUGC