ncRNA ID | ath-miRf10650-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 19 |
Mature sequence(if miRNA) | NA - GCAGUCAAUGCAACUUAAU - NA |
Stem-loop(if miRNA) |
      A      ---CU       -C     U   --------U     A  UCUAUGCAAUCUCAAU GCAGUC AUGCAA     UAAUGAA  CAGCG GGA         AGGUU CA                C |||||| ||||||     |||||||  ||||| |||         ||||| || CGUCAG UACGUU     AUUAUUU  GUCGC UCU         AAACA AC                U       G      CUCUU       CC     U   UUUUCUCUU     -  GUAUGGUGAGGUUGUU |
Stem-loop sequence | GCAGUCAAUGCAACUUAAUGAACCAGCGUGGAUAGGUUACAUCUAUGCAAUCUCAAUCUUUGUUGGAGUGGUAUGCAACAAAUUCUCUUUUUCUUCGCUGCCUUUAUUAUUCUCUUGCAUGGACUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001334214.1 |
|
2.5 | Arabidopsis thaliana LETM1-like protein (LETM2), mRNA | LETM1-like protein(LETM2) | coding protein | psRNATarget | |||||||||
NM_001334213.1 |
|
2.5 | Arabidopsis thaliana LETM1-like protein (LETM2), mRNA | LETM1-like protein(LETM2) | coding protein | psRNATarget | |||||||||
NM_105228.3 |
|
2.5 | Arabidopsis thaliana LETM1-like protein (LETM2), mRNA | LETM1-like protein(LETM2) | coding protein | psRNATarget |