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BaseInfo

ncRNA ID ath-miRf10650-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 19
Mature sequence(if miRNA) NA - GCAGUCAAUGCAACUUAAU - NA
Stem-loop(if miRNA)       A      ---CU       -C     U   --------U     A  UCUAUGCAAUCUCAAU
GCAGUC AUGCAA     UAAUGAA  CAGCG GGA         AGGUU CA                C
|||||| ||||||     |||||||  ||||| |||         ||||| ||
CGUCAG UACGUU     AUUAUUU  GUCGC UCU         AAACA AC                U
      G      CUCUU       CC     U   UUUUCUCUU     -  GUAUGGUGAGGUUGUU
Stem-loop sequence GCAGUCAAUGCAACUUAAUGAACCAGCGUGGAUAGGUUACAUCUAUGCAAUCUCAAUCUUUGUUGGAGUGGUAUGCAACAAAUUCUCUUUUUCUUCGCUGCCUUUAUUAUUCUCUUGCAUGGACUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001334214.1
ncRNA:19   UAAUUCAACGUAACUGACG   1
  ||*|||||||||||=||||
targets:2204   AUGAAGUUGCAUUGGCUGC   2222

2.5 Arabidopsis thaliana LETM1-like protein (LETM2), mRNA LETM1-like protein(LETM2) coding protein psRNATarget
NM_001334213.1
ncRNA:19   UAAUUCAACGUAACUGACG   1
  ||*|||||||||||=||||
targets:2228   AUGAAGUUGCAUUGGCUGC   2246

2.5 Arabidopsis thaliana LETM1-like protein (LETM2), mRNA LETM1-like protein(LETM2) coding protein psRNATarget
NM_105228.3
ncRNA:19   UAAUUCAACGUAACUGACG   1
  ||*|||||||||||=||||
targets:2482   AUGAAGUUGCAUUGGCUGC   2500

2.5 Arabidopsis thaliana LETM1-like protein (LETM2), mRNA LETM1-like protein(LETM2) coding protein psRNATarget