ncRNA ID | novel_bna_miR1040 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC9:15695669-15695778 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 87 - AUCUAUUUUGUGAUUUGUUGAACA - 110 |
Stem-loop(if miRNA) |
--  UG  --   U          A   UUUUCAU      A  --   UUUUU      A   UU  AU  GUU CAAAAUAGAU AUG       AUAUUA UG  UAC     CAGUUU U   ||  ||  ||| |||||||||| |||       |||||| ||  |||     |||||| C   AA  UG  UAG GUUUUAUCUA UGU       UAUAGU AC  AUG     GUCAAA A AC  GU  UU   U          A   -----UU      A  CA   ----U      A |
Stem-loop sequence | UUUGAUGUUUCAAAAUAGAUAAUGUUUUCAUAUAUUAAUGUACUUUUUCAGUUUAUCAAAAACUGUGUAACCAAUGAUAUUUUGUAAUCUAUUUUGUGAUUUGUUGAACA |