ncRNA ID | novel_bna_miR1039 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC9:11873754-11873882 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 106 - UUUCCGAGGACUUGUUUUGUCGGU - 129 |
Stem-loop(if miRNA) |
--       C   U A         ---U       -  -AA   G       A   U   G     A   CGACAAA UAG G UCCUCGGAA    UUCCUCG AA   UUU UUUCCUC GAA UCC UCGGA A   ||||||| ||| | |||||||||    ||||||| ||   ||| ||||||| ||| ||| |||||   GCUGUUU GUU C AGGAGCCUU    AAGGAGC UU   GAA AAAGGAG CUU AGG AGCCU A UG       U   - -         UAUU       C  AAA   G       C   U   G     U |
Stem-loop sequence | CGACAAACUAGUGAUCCUCGGAAUUUCCUCGAAAAUUUGUUUCCUCAGAAUUCCGUCGGAAAAUUCCGAGGGAUUUCCGAGGAAAGAAGAAAUUCCGAGGAAUUAUUUCCGAGGACUUGUUUUGUCGGU |