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BaseInfo

ncRNA ID novel_bna_miR1033
Species Brassica napus
Class miRNA
Genome position ChrC8:12098316-12098508 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 26
Mature sequence(if miRNA) 1 - AACUAAGAAAAGCUAAGAACCGGCUC - 26
Stem-loop(if miRNA) --A                  -AA       UC       A   U     AUU   CUAAA    A                                 C
   CUGGUUCUUAGCUUUUUU   UUAAAAG  AAGAAAC GUU CUUAA   CCG     UUAA AACUCCACUCUAAGAACUCGGGUUAAUCAUGGU U
   ||||||||||||||||||   |||||||  ||||||| ||| |||||   |||     |||| |||||||||||||||||||||||||||||||||
   GGCCAAGAAUCGAAAAGA   AAUUUUC  UUCUUUG CAA GAAUU   GGC     AAUU UUGGGGUGAGAUUCUUGGGCCCAAUUAGUACCA A
CUC                  AUC       GA       C   -     ---   --UUC    C                                 G
Stem-loop sequence ACUGGUUCUUAGCUUUUUUAAUUAAAAGUCAAGAAACAGUUUCUUAAAUUCCGCUAAAUUAAAAACUCCACUCUAAGAACUCGGGUUAAUCAUGGUCUAGACCAUGAUUAACCCGGGUUCUUAGAGUGGGGUUCUUAACUUCGGUUAAGAACCGUUUCUUAGCUUUUAACUAAGAAAAGCUAAGAACCGGCUC