ncRNA ID | novel_bna_miR1033 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC8:12098316-12098508 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 26 |
Mature sequence(if miRNA) | 1 - AACUAAGAAAAGCUAAGAACCGGCUC - 26 |
Stem-loop(if miRNA) |
--A                  -AA       UC       A   U     AUU   CUAAA    A                                 C    CUGGUUCUUAGCUUUUUU   UUAAAAG  AAGAAAC GUU CUUAA   CCG     UUAA AACUCCACUCUAAGAACUCGGGUUAAUCAUGGU U    ||||||||||||||||||   |||||||  ||||||| ||| |||||   |||     |||| |||||||||||||||||||||||||||||||||    GGCCAAGAAUCGAAAAGA   AAUUUUC  UUCUUUG CAA GAAUU   GGC     AAUU UUGGGGUGAGAUUCUUGGGCCCAAUUAGUACCA A CUC                  AUC       GA       C   -     ---   --UUC    C                                 G |
Stem-loop sequence | ACUGGUUCUUAGCUUUUUUAAUUAAAAGUCAAGAAACAGUUUCUUAAAUUCCGCUAAAUUAAAAACUCCACUCUAAGAACUCGGGUUAAUCAUGGUCUAGACCAUGAUUAACCCGGGUUCUUAGAGUGGGGUUCUUAACUUCGGUUAAGAACCGUUUCUUAGCUUUUAACUAAGAAAAGCUAAGAACCGGCUC |