ncRNA ID | novel_bna_miR1028 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA2:30911707-30911875 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363496 |
Length | 24 |
Mature sequence(if miRNA) | 146 - AAUAUGGACUGGGGUUAGAGAUGU - 169 |
Stem-loop(if miRNA) |
--     C   A   C                    U       -------------UU   UA     C      --    -       CAU   AUCUC AAC CCA UUUAUAUUUUACUCCAAAAU GUGAAAA               GAG  AUGAA AAAAAA  AAAG AUUACUC   U   ||||| ||| ||| |||||||||||||||||||| |||||||               |||  ||||| ||||||  |||| |||||||   UAGAG UUG GGU AGGUAUAAAAUGAGGUUUUA UAUUUUU               UUC  UACUU UUUUUU  UUUC UAAUGAG   U UG     A   G   C                    -       UAUCUCCCUUUUUAU   GC     A      AU    G       AUA |
Stem-loop sequence | AUCUCCAACACCACUUUAUAUUUUACUCCAAAAUUGUGAAAAUUGAGUAAUGAACAAAAAAAAAGAUUACUCCAUUUAUAGAGUAAUGCUUUUAUUUUUUAUUCAUCGCUUUAUUUUUCCCUCUAUUUUUUAUAUUUUGGAGUAAAAUAUGGACUGGGGUUAGAGAUGU |