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BaseInfo

ncRNA ID novel_bna_miR1024
Species Brassica napus
Class miRNA
Genome position ChrC7:30175606-30175715 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363496
Length 23
Mature sequence(if miRNA) 88 - GAGGAAAGAGUAGUUCGUCGUUA - 110
Stem-loop(if miRNA) --       GA    -U         AAG  A     UAUUACACCGUCU          A
  GAGGAAA  GUAG  UCGUCGUUA   CC CGUGA             UUACGAUGAA U
  |||||||  ||||  |||||||||   || |||||             |||||||||| C
  CUCCUUU  UAUU  AGUAGCAAU   GG GCAUU             AAUGCUGCUU A
UG       -A    UU         AAA  A     -----------UC          U
Stem-loop sequence GAGGAAAGAGUAGUUCGUCGUUAAAGCCACGUGAUAUUACACCGUCUUUACGAUGAAAUCAUUUCGUCGUAACUUUACGAGGAAAUAACGAUGAUUUUAUAUUUCCUCGU