ncRNA ID | novel_bna_miR1020 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA2:7688524-7688677 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495;SRR2015555 |
Length | 24 |
Mature sequence(if miRNA) | 131 - AUUAUAGAGACAUACAUUGGAGCA - 154 |
Stem-loop(if miRNA) |
--            C              UC        -UAUA              AAUCA    --     C     U   CUCCAAUGUAUG CUCUAUAAUAGGGU  CUUUAUUU     GGAAAAUAUAGAGG     UACU  UUUUA CUCUA A   |||||||||||| ||||||||||||||  ||||||||     ||||||||||||||     ||||  ||||| |||||   GAGGUUACAUAC GAGAUAUUAUCUCA  GAGAUAAA     CCUUUUAUAUCUCU     AUGA  AAAGU GAGAU U AC            A              --        UAUCC              ---AA    UA     A     U |
Stem-loop sequence | CUCCAAUGUAUGCCUCUAUAAUAGGGUUCCUUUAUUUUAUAGGAAAAUAUAGAGGAAUCAUACUUUUUACCUCUAUAUUUAGAGAUGAAAAUAGUAAAUCUCUAUAUUUUCCCCUAUAAAUAGAGACUCUAUUAUAGAGACAUACAUUGGAGCA |