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BaseInfo

ncRNA ID novel_bna_miR1020
Species Brassica napus
Class miRNA
Genome position ChrA2:7688524-7688677 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495;SRR2015555
Length 24
Mature sequence(if miRNA) 131 - AUUAUAGAGACAUACAUUGGAGCA - 154
Stem-loop(if miRNA) --            C              UC        -UAUA              AAUCA    --     C     U
  CUCCAAUGUAUG CUCUAUAAUAGGGU  CUUUAUUU     GGAAAAUAUAGAGG     UACU  UUUUA CUCUA A
  |||||||||||| ||||||||||||||  ||||||||     ||||||||||||||     ||||  ||||| |||||
  GAGGUUACAUAC GAGAUAUUAUCUCA  GAGAUAAA     CCUUUUAUAUCUCU     AUGA  AAAGU GAGAU U
AC            A              --        UAUCC              ---AA    UA     A     U
Stem-loop sequence CUCCAAUGUAUGCCUCUAUAAUAGGGUUCCUUUAUUUUAUAGGAAAAUAUAGAGGAAUCAUACUUUUUACCUCUAUAUUUAGAGAUGAAAAUAGUAAAUCUCUAUAUUUUCCCCUAUAAAUAGAGACUCUAUUAUAGAGACAUACAUUGGAGCA