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BaseInfo

ncRNA ID novel_bna_miR1011
Species Brassica napus
Class miRNA
Genome position ChrA4:12810142-12810245 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR538253
Length 18
Mature sequence(if miRNA) 1 - CGGAAUUUCGUCGGAAUC - 18
Stem-loop(if miRNA) --     U     C     C      AUA    ---AAUU     UUC   AAAA
  CGGAA UUCGU GGAAU AUUAAA   UACC       AGCGG   GCG    U
  ||||| ||||| ||||| ||||||   ||||       |||||   |||
  GCCUU AGGCA CCUUA UAAUUU   AUGG       UUGUU   CGC    U
CA     U     C     -      --A    GCCUUUU     UGA   ACUU
Stem-loop sequence CGGAAUUUCGUCGGAAUCAUUAAAAUAUACCAAUUAGCGGUUCGCGAAAAUUUUCACGCAGUUUGUUUUUUCCGGGUAAUUUAAUAUUCCCACGGAUUUCCGAC