ncRNA ID | novel_bna_miR1000 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC3:30810192-30810298 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR538253 |
Length | 18 |
Mature sequence(if miRNA) | 90 - CGGAAUUUCGUCGGAAUC - 107 |
Stem-loop(if miRNA) |
--     U       G   C       A   AUA -   UU     UU    AAAA   CGGAA UUCGUCG AAU AUUAAAU UAU   C CAA  GGCGG  CGCG    U   ||||| ||||||| ||| ||||||| |||   | |||  |||||  ||||   GCCUU AGGCAGC UUA UAGUUUA AUG   G GUU  UUGUU  GCGC    U CA     U       A   -       -   --G C   UU     UG    ACUU |
Stem-loop sequence | CGGAAUUUCGUCGGAAUCAUUAAAUAUAUAUACCAAUUGGCGGUUCGCGAAAAUUUUCACGCGGUUUGUUUUUUGCGGGUAAUUUGAUAUUACGACGGAUUUCCGAC |