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BaseInfo

ncRNA ID novel_bna_miR1000
Species Brassica napus
Class miRNA
Genome position ChrC3:30810192-30810298 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR538253
Length 18
Mature sequence(if miRNA) 90 - CGGAAUUUCGUCGGAAUC - 107
Stem-loop(if miRNA) --     U       G   C       A   AUA -   UU     UU    AAAA
  CGGAA UUCGUCG AAU AUUAAAU UAU   C CAA  GGCGG  CGCG    U
  ||||| ||||||| ||| ||||||| |||   | |||  |||||  ||||
  GCCUU AGGCAGC UUA UAGUUUA AUG   G GUU  UUGUU  GCGC    U
CA     U       A   -       -   --G C   UU     UG    ACUU
Stem-loop sequence CGGAAUUUCGUCGGAAUCAUUAAAUAUAUAUACCAAUUGGCGGUUCGCGAAAAUUUUCACGCGGUUUGUUUUUUGCGGGUAAUUUGAUAUUACGACGGAUUUCCGAC