| ncRNA ID | ath-miR4227 |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr1:22372670-22372790 [+] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 21 - UCACUGGUACCAAUCAUUCCA - 41 |
| Stem-loop(if miRNA) |
---- CACGACAA C C G U U ACU U GUUCA CA AAUUUCA UG UACCAAUCA UCCAACAAA UAUA CGGUC C ||||| || ||||||| || ||||||||| ||||||||| |||| ||||| A UAAGU GU UUAAAGU AC AUGGUUAGU AGGUUGUUU AUAU GUUAG G UUUU --UUUUAA U - A U U --- G |
| Stem-loop sequence | GUUCACACGACAACACAAUUUCACUGGUACCAAUCAUUCCAACAAAUUAUAACUCGGUCUCAGGGAUUGUAUAUUUUGUUGGAUUGAUUGGUAACAUGAAAUUUUGAAUUUUUGAAUUUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_113301.2 |
|
1.5 | Arabidopsis thaliana F-box and associated interaction domains-containing protein partial mRNA | F-box and associated interaction domains-containing protein(AT3G23960) | coding protein | psRNATarget | |||||||||
| NM_126392.2 |
|
2.5 | Arabidopsis thaliana Mo25 family protein mRNA | Mo25 family protein(AT2G03410) | coding protein | psRNATarget | |||||||||
| AK176008.1 |
|
2.5 | Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-70-G12 | NA | coding protein | psRNATarget | |||||||||
| AK175754.1 |
|
2.5 | Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-31-A15 | NA | coding protein | psRNATarget |
| 1 | PMID:20407023
"Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus"; Ma Z, Coruh C, Axtell MJ; Plant Cell. 22:1090-1103(2010). |