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BaseInfo

ncRNA ID novel_bna_miR990
Species Brassica napus
Class miRNA
Genome position ChrA4:34244526-34244571 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR538225
Length 21
Mature sequence(if miRNA) 26 - GGUGUAACACUGUAGCAACGG - 46
Stem-loop(if miRNA) --U    A       C      U
   UUGC ACAGUGU ACACUA A
   |||| ||||||| ||||||
   AACG UGUCACA UGUGGU U
GGC    A       A      U
Stem-loop sequence UUUGCAACAGUGUCACACUAUAUUUGGUGUAACACUGUAGCAACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013860543.1
ncRNA:21   GGCAACGAUGUCACAAUGUGG   1
  =||**|=||||||||||||||
targets:1544   UCGCGGUUACAGUGUUACACC   1564

3.0 PREDICTED: Brassica napus cation/H(+) antiporter 9-like (LOC106419726), mRNA cation/H(+) antiporter 9-like(LOC106419726) coding protein psRNATarget