| ncRNA ID | novel_bna_miR987 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrC6:3976942-3977060 [-] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR1363496 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGAUAUGAAGUUGGAUUGGAGCAU - 24 |
| Stem-loop(if miRNA) |
--U - A -GAG GAACAAAUAAAAAAUA CUCCAA CCAA CUUCAUAUCUCAUUCUAUGAUA UAUU A |||||| |||| |||||||||||||||||||||| |||| GAGGUU GGUU GAAGUAUAGAGUAAGAUAUUAU AAUG A UAC A - AUCA AGGUAUUUAUCUUAUU |
| Stem-loop sequence | UCUCCAACCAAACUUCAUAUCUCAUUCUAUGAUAGAGUAUUGAACAAAUAAAAAAUAAAUUAUUCUAUUUAUGGAGUAAACUAUAUUAUAGAAUGAGAUAUGAAGUUGGAUUGGAGCAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013789828.1 |
|
1.0 | PREDICTED: Brassica napus transmembrane and coiled-coil domain-containing protein 4-like (LOC106349836), transcript variant X1, mRNA | transmembrane and coiled-coil domain-containing protein 4-like(LOC106349836) | coding protein | psRNATarget | |||||||||
| XM_013856975.1 |
|
2.5 | PREDICTED: Brassica napus dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic-like (LOC106416141), mRNA | dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic-like(LOC106416141) | coding protein | psRNATarget |