Search result

BaseInfo

ncRNA ID	ath-miRf10644-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UGUUGCCGUAGCUGCAGCGGC - NA
Stem-loop(if miRNA)	U  UC                      U     U  -GUCUUCCAUGGUUG   CUGCCGCCAAGUC  GU  CUGUUGCCGUAGCUGCAGCGGC GUUGU GC               UUG             A  ||  |||||||||||||||||||||| ||||| ||               |||             G  CG  GACAGCGGUAUUGACGUCGUCG CGACG CG               CCU             C A  UC                      U     U  UCUUUCAAGAUUUCA   CCUUAGGCUCAAA
Stem-loop sequence	UGUUCCUGUUGCCGUAGCUGCAGCGGCUGUUGUUGCGUCUUCCAUGGUUGUUGCUGCCGCCAAGUCAGCAAACUCGGAUUCCUCCACUUUAGAACUUUCUGCUGCAGCUGCUGCUGCAGUUAUGGCGACAGCUGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK230437.1	ncRNA:21   CGGCGACGUCGAUGCCGUUGU   1   ||=|||||||||=|||||||| targets:549   GCUGCUGCAGCUGCGGCAACA   569 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for putative protein serine/threonine phosphatase alpha, partial cds, clone: RAFL25-41-F03	NA	coding protein	psRNATarget
AK316968.1	ncRNA:21   CGGCGACGUCGAUGCCGUUGU   1   ||=|||||||||=|||||||| targets:1465   GCUGCUGCAGCUGCGGCAACA   1485 Target Full Sequence	2.5	Arabidopsis thaliana AT1G08420 mRNA, complete cds, clone: RAFL16-56-H16	NA	coding protein	psRNATarget
NM_001198006.1	ncRNA:21   CGGCGACGUCGAUGCCGUUGU   1   ||=|||||||||=|||||||| targets:1797   GCUGCUGCAGCUGCGGCAACA   1817 Target Full Sequence	2.5	Arabidopsis thaliana BRI1 suppressor 1 (BSU1)-like 2 (BSL2), mRNA	BRI1 suppressor 1 (BSU1)-like 2(BSL2)	coding protein	psRNATarget
NM_100715.4	ncRNA:21   CGGCGACGUCGAUGCCGUUGU   1   ||=|||||||||=|||||||| targets:1890   GCUGCUGCAGCUGCGGCAACA   1910 Target Full Sequence	2.5	Arabidopsis thaliana BRI1 suppressor 1 (BSU1)-like 2 (BSL2), mRNA	BRI1 suppressor 1 (BSU1)-like 2(BSL2)	coding protein	psRNATarget