ncRNA ID | novel_bna_miR970 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC5:2961087-2961173 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUUGAGUUGGUAAAGAAGUGGAGG - 24 |
Stem-loop(if miRNA) |
--     G      -    AG    G     UUUCAA   -       CUUGA UUGGUA AAGA  UGGA GAUCA      AGU UUAUC   ||||| |||||| ||||  |||| |||||      ||| ||||U   GAAUU AAUUAU UUCU  ACCU CUAGU      UCA AAUAU UU     A      G    --    A     UCCCCC   C     |
Stem-loop sequence | CUUGAGUUGGUAAAGAAGUGGAGGAUCAUUUCAAAGUUUAUCUUAUAACACUCCCCCUUGAUCAUCCAUCUUGUAUUAAAUUAAGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013889879.1 |
|
3.0 | PREDICTED: Brassica napus uncharacterized protein At2g34160-like (LOC106447926), mRNA | uncharacterized protein At2g34160-like(LOC106447926) | coding protein | psRNATarget | |||||||||
XM_013791872.1 |
|
3.0 | PREDICTED: Brassica napus uncharacterized protein At2g34160-like (LOC106352201), mRNA | uncharacterized protein At2g34160-like(LOC106352201) | coding protein | psRNATarget |