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BaseInfo

ncRNA ID novel_bna_miR968
Species Brassica napus
Class miRNA
Genome position ChrC2:10884703-10884747 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR538225
Length 22
Mature sequence(if miRNA) 1 - GACGGAAUUCCGACGGAAAUGG - 22
Stem-loop(if miRNA) --  C              AAU
  GA GGAAUUCCGACGGA   G
  || ||||||||||||||   G
  CU CUUUAAGGCUGCUU   C
GG  C              GAA
Stem-loop sequence GACGGAAUUCCGACGGAAAUGGCAAGUUCGUCGGAAUUUCCUCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013830098.1
ncRNA:19   AAAGGCAGCCUUA-AGGCAG   1
  |||||||||||||-||||||
targets:1   UUUCCGUCGGAAUGUCCGUC   20

3.0 PREDICTED: Brassica napus probable LRR receptor-like serine/threonine-protein kinase At1g51880 (LOC106389756), partial mRNA probable LRR receptor-like serine/threonine-protein kinase At1g51880(LOC106389756) coding protein psRNATarget