ncRNA ID | novel_bna_miR966 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC5:31031046-31031134 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 23 |
Mature sequence(if miRNA) | 67 - UCUGAGAGUCUGGAACUGCAUCA - 89 |
Stem-loop(if miRNA) |
AGAG AAC --G AGAAGACGAUGGACCGGAAGAAGAUGU UCUGG U CAUC A ||||| | |||| C CUACG U GGUC C ---A --- CAA UGAGAGUCUGAAGAAUCUCUACCAAGG |
Stem-loop sequence | AGAGUCUGGAACUGCAUCAGAAGACGAUGGACCGGAAGAAGAUGUACCGGAACCAUCUCUAAGAAGUCUGAGAGUCUGGAACUGCAUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013844292.1 |
|
2.5 | PREDICTED: Brassica napus predicted GPI-anchored protein 58 (LOC106403464), mRNA | predicted GPI-anchored protein 58(LOC106403464) | coding protein | psRNATarget |