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BaseInfo

ncRNA ID	novel_bna_miR962
Species	Brassica napus
Class	miRNA
Genome position	ChrA6:11442836-11442888 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR538151;SRR538225;SRR538253
Length	25
Mature sequence(if miRNA)	1 - GUUUCCUCGGAAUUUCCUCGGAAUC - 25
Stem-loop(if miRNA)	--                      AU   UUCCGAGGAAAUUCCGAGGAAG  A   ||||||||||||||||||||||  A   AAGGCUCCUUUAAGGCUCCUUU  G CU                      GG
Stem-loop sequence	UUCCGAGGAAAUUCCGAGGAAGAUAAGGGUUUCCUCGGAAUUUCCUCGGAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013795208.1	ncRNA:25   CU--AAGGCUCCUUUAAGGCUCCUUUG   1   ||--||||||||||||||||||*|||| targets:885   GAAUUUCCGAGGAAAUUCCGAGAAAAC   911 Target Full Sequence	1.5	PREDICTED: Brassica napus PYK10-binding protein 1-like (LOC106355223), mRNA	PYK10-binding protein 1-like(LOC106355223)	coding protein	psRNATarget
XM_013853720.1	ncRNA:25   CUAAGGCUCCUUUAAGGCUCCUUUG   1   *=*||=|*|||=||||||||||||| targets:545   UGGUCUGUGGAGAUUCCGAGGAAAC   569 Target Full Sequence	2.0	PREDICTED: Brassica napus uncharacterized protein At2g29880-like (LOC106412831), partial mRNA	uncharacterized protein At2g29880-like(LOC106412831)	coding protein	psRNATarget
XM_013839473.1	ncRNA:25   CUAAGGCUCCUUUAAGGCUCCUUUG   1   *=*||=|*|||=||||||||||||| targets:988   UGGUCUGUGGAGAUUCCGAGGAAAC   1012 Target Full Sequence	2.0	PREDICTED: Brassica napus L10-interacting MYB domain-containing protein-like (LOC106398979), transcript variant X2, mRNA	L10-interacting MYB domain-containing protein-like(LOC106398979)	coding protein	psRNATarget
XM_013839470.1	ncRNA:25   CUAAGGCUCCUUUAAGGCUCCUUUG   1   *=*||=|*|||=||||||||||||| targets:993   UGGUCUGUGGAGAUUCCGAGGAAAC   1017 Target Full Sequence	2.0	PREDICTED: Brassica napus L10-interacting MYB domain-containing protein-like (LOC106398979), transcript variant X1, mRNA	L10-interacting MYB domain-containing protein-like(LOC106398979)	coding protein	psRNATarget
XM_013804584.1	ncRNA:25   CUAAGGCUCCUUUAAGGCUCCUUUG   1   |*|||*|*||||||||*|||||||| targets:704   GCUUCAGUGGAAAUUCAGAGGAAAC   728 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106365134 (LOC106365134), mRNA	uncharacterized LOC106365134(LOC106365134)	coding protein	psRNATarget
XM_013825981.1	ncRNA:25   CUAAGGCUCCUUUAAGGCUCCUUUG   1   |*|||*|*||||||||*|||||||| targets:779   GCUUCGGUGGAAAUUCAGAGGAAAC   803 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106386088 (LOC106386088), mRNA	uncharacterized LOC106386088(LOC106386088)	coding protein	psRNATarget
XM_013821534.1	ncRNA:25   CUAAGGCUCCUUUAAGGCUCCUUUG   1   *=*||=|*|||=||||||||||||* targets:966   UGGUCUGUGGAGAUUCCGAGGAAAG   990 Target Full Sequence	3.0	PREDICTED: Brassica napus L10-interacting MYB domain-containing protein-like (LOC106381612), transcript variant X2, mRNA	L10-interacting MYB domain-containing protein-like(LOC106381612)	coding protein	psRNATarget
XM_013821533.1	ncRNA:25   CUAAGGCUCCUUUAAGGCUCCUUUG   1   *=*||=|*|||=||||||||||||* targets:981   UGGUCUGUGGAGAUUCCGAGGAAAG   1005 Target Full Sequence	3.0	PREDICTED: Brassica napus L10-interacting MYB domain-containing protein-like (LOC106381612), transcript variant X1, mRNA	L10-interacting MYB domain-containing protein-like(LOC106381612)	coding protein	psRNATarget