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BaseInfo

ncRNA ID novel_bna_miR957
Species Brassica napus
Class miRNA
Genome position ChrC8:12479537-12479726 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR538151
Length 18
Mature sequence(if miRNA) 1 - GUAGAUUUUGGUGAGACU - 18
Stem-loop(if miRNA) ----    AUGAGAA        -------ACAAAACA   UUAUGGGAGGCAUAAUCUACUUGGUGAUUCAAUGAGAAUAUAAAUGCAACAAGACAAC
    UCAU       UACAUGUA               UCC                                                          A
    ||||       ||||||||               |||                                                          A
    AGUG       AUGUGUAU               UGU                                                          U
UCAG    GUUUUAG        AACAUGAUAAAAUUU   UAGAAUGGAUACAAUGAAAAAGGUUUAAACUAAAGGUAUUCUUGAAUUUCGUGAUUAU
Stem-loop sequence UCAUAUGAGAAUACAUGUAACAAAACAUCCUUAUGGGAGGCAUAAUCUACUUGGUGAUUCAAUGAGAAUAUAAAUGCAACAAGACAACAAUUAUUAGUGCUUUAAGUUCUUAUGGAAAUCAAAUUUGGAAAAAGUAACAUAGGUAAGAUUGUUUUAAAAUAGUACAAUAUGUGUAGAUUUUGGUGAGACU