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BaseInfo

ncRNA ID	ath-miRf10641-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	25
Mature sequence(if miRNA)	NA - GUUUGCCUAUCGCUGAUUCAGCGAC - NA
Stem-loop(if miRNA)	CUA      -          A    U       -      ------         CAAUUUUUA        A AAAGUUGUUUGUUUGC   UCGCUG AUUCAGCGAC AAAA UAGCGAC AGUCGC      CAGCGACUG         GUCGCUGA A ||||||||||||||||   |||||| |||||||||| |||| ||||||| ||||||      |||||||||         |||||||| U UUUCAACAAGCAAACG   AGCGAC UAGGUCGCUG UUUU GUCGUUG UUAGCG      GUUGCUGAC         UAGCGAUU U                 UAC      C          G    C       A      ACUUUG         ---------        U
Stem-loop sequence	AAAGUUGUUUGUUUGCCUAUCGCUGAUUCAGCGACAAAAAUUAGCGACAGUCGCCAGCGACUGCAAUUUUUAGUCGCUGAAAUUUUUAGCGAUCAGUCGUUGGUUUCAGCGAUUAGUUGCUGCUUUUGGUCGCUGGAUCCAGCGACAUGCAAACGAACAACUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BX825180.1	ncRNA:25   CAG--CGACUUAGUCGCUAUCCGUUUG   1   ||=--|=*|||||*||||||||||||* targets:73   GUUCAGUGGAAUCUGCGAUAGGCAAAA   99 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZA11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT014721.1	ncRNA:25   CAG--CGACUUAGUCGCUAUCCGUUUG   1   ||=--|=*|||||*||||||||||||* targets:620   GUUCAGUGGAAUCUGCGAUAGGCAAAA   646 Target Full Sequence	2.0	Arabidopsis thaliana At3g17365.1 mRNA sequence	NA	coding protein	psRNATarget
AY122997.1	ncRNA:25   CAG--CGACUUAGUCGCUAUCCGUUUG   1   ||=--|=*|||||*||||||||||||* targets:623   GUUCAGUGGAAUCUGCGAUAGGCAAAA   649 Target Full Sequence	2.0	Arabidopsis thaliana unknown protein (At3g17365) mRNA, complete cds	NA	coding protein	psRNATarget
AY050973.1	ncRNA:25   CAG--CGACUUAGUCGCUAUCCGUUUG   1   ||=--|=*|||||*||||||||||||* targets:660   GUUCAGUGGAAUCUGCGAUAGGCAAAA   686 Target Full Sequence	2.0	Arabidopsis thaliana unknown protein (At3g17365) mRNA, complete cds	NA	coding protein	psRNATarget
NM_112615.4	ncRNA:25   CAG--CGACUUAGUCGCUAUCCGUUUG   1   ||=--|=*|||||*||||||||||||* targets:723   GUUCAGUGGAAUCUGCGAUAGGCAAAA   749 Target Full Sequence	2.0	Arabidopsis thaliana S-adenosyl-L-methionine-dependent methyltransferases superfamily protein mRNA	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein(AT3G17365)	coding protein	psRNATarget
NM_001202988.1	ncRNA:25   CAG--CGACUUAGUCGCUAUCCGUUUG   1   ||=--|=*|||||*||||||||||||* targets:839   GUUCAGUGGAAUCUGCGAUAGGCAAAA   865 Target Full Sequence	2.0	Arabidopsis thaliana S-adenosyl-L-methionine-dependent methyltransferases superfamily protein mRNA	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein(AT3G17365)	coding protein	psRNATarget
NM_128095.2	ncRNA:25   CAGCGACUUAGUCGCUAUCCGUUUG   1   |||||||||*||||||*|||||||| targets:291   GUCGCUGAACCAGCGACAGGCAAAC   315 Target Full Sequence	2.5	Arabidopsis thaliana RING/U-box superfamily protein partial mRNA	RING/U-box superfamily protein(AT2G25370)	coding protein	psRNATarget