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BaseInfo

ncRNA ID ath-miRf10640-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UUGCCCUCUUCUGCAGCAGA - NA
Stem-loop(if miRNA)    -GA           UC  C  CA      AAU
GAC   AAUUGCCCUCU  UG AG  GAAGAU   G
|||   |||||||||||  || ||  ||||||
UUG   UUGACGGGAGG  AC UU  CUUCUA   C
   ACG           -C  U  AC      CCU
Stem-loop sequence GACGAAAUUGCCCUCUUCUGCAGCAGAAGAUAAUGCUCCAUCUUCCAUUUCACGGAGGGCAGUUGCAGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK229869.1
ncRNA:20   AGACGACGUCUUCUCCCGUU   1
  ||||||||||||||||||||
targets:559   UCUGCUGCAGAAGAGGGCAA   578

0.0 Arabidopsis thaliana mRNA for putative chloroplast inner envelope protein, partial cds, clone: RAFL22-12-D05 NA coding protein psRNATarget
AY094426.1
ncRNA:20   AGACGACGUCUUCUCCCGUU   1
  ||||||||||||||||||||
targets:3109   UCUGCUGCAGAAGAGGGCAA   3128

0.0 Arabidopsis thaliana At1g06940/F4H5_1 mRNA, complete cds NA coding protein psRNATarget
AY099850.1
ncRNA:20   AGACGACGUCUUCUCCCGUU   1
  ||||||||||||||||||||
targets:3121   UCUGCUGCAGAAGAGGGCAA   3140

0.0 Arabidopsis thaliana chloroplast inner envelope protein, putative (At1g06950) mRNA, complete cds NA coding protein psRNATarget
NM_100568.4
ncRNA:20   AGACGACGUCUUCUCCCGUU   1
  ||||||||||||||||||||
targets:3159   UCUGCUGCAGAAGAGGGCAA   3178

0.0 Arabidopsis thaliana translocon at the inner envelope membrane of chloroplasts 110 (TIC110), mRNA translocon at the inner envelope membrane of chloroplasts 110(TIC110) coding protein psRNATarget