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BaseInfo

ncRNA ID ath-miRf10639-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UUGGGGCUUUGAGAAUUUCUGGC - NA
Stem-loop(if miRNA) U     U                 A       C     -     CAAAUCUGUUAAAGGUUGCCGACC
 UCAUU GAUUUGGGGCUUUGAGA UUUCUGG CCAUC CAACC                        A
 ||||| ||||||||||||||||| ||||||| ||||| |||||                        C
 AGUAA CUAAACCCCGAAACUCU AAAGACC GGUAG GGUGU                        A
A     C                 A       C     C     GAAAGAGACCGGUUAUAACUUUCC
Stem-loop sequence UUCAUUUGAUUUGGGGCUUUGAGAAUUUCUGGCCCAUCCAACCCAAAUCUGUUAAAGGUUGCCGACCACACCUUUCAAUAUUGGCCAGAGAAAGUGUGGCGAUGGCCCAGAAAAUCUCAAAGCCCCAAAUCCAAUGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BX831621.1
ncRNA:23   CGGUCUUUAAGAGUUUCGGGGUU   1
  **||*||||||||||||*|||||
targets:451   UACACAAAUUCUCAAAGACCCAA   473

2.5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH19ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) NA coding protein psRNATarget