ncRNA ID | novel_bna_miR935 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC5:16492626-16492711 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAAUAGAGUAGAAAAUAGAGUGA - 24 |
Stem-loop(if miRNA) |
--AA                 -A  GAUGAACAAAAAAAAAAC     AAUAGAGUAGAAAAUAG  GU                  A     |||||||||||||||||  ||                  A     UUAUCUCAUUUUUUAUU  AA                  A GAUA                 CA  UGAGGUUUAUAUCUCAUU |
Stem-loop sequence | AAAAUAGAGUAGAAAAUAGAGUGAUGAACAAAAAAAAAACAAAUUACUCUAUAUUUGGAGUAAACUUAUUUUUUACUCUAUUAUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013896499.1 |
|
2.5 | PREDICTED: Brassica napus uncharacterized LOC106454373 (LOC106454373), mRNA | uncharacterized LOC106454373(LOC106454373) | coding protein | psRNATarget |