ncRNA ID | novel_bna_miR929 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC5:14408030-14408159 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUCGAGGACUUUUUUCGUCGGUA - 23 |
Stem-loop(if miRNA) |
--                      --U     GA      --GAA           U   G     A   CCGACGAAAAAAGUCCUCGGAA   AUUCC  GGAAAU     UUUCCUCGGAA UCC UCGGA A   ||||||||||||||||||||||   |||||  ||||||     ||||||||||| ||| |||||   GGCUGCUUUUUUCAGGAGCUUU   UGAGG  CCUUUA     AAAGGAGCCUU AGG AGCCU U AU                      UAU     AG      AGUAG           U   G     U |
Stem-loop sequence | CCGACGAAAAAAGUCCUCGGAAUAUUCCGAGGAAAUGAAUUUCCUCGGAAUUCCGUCGGAAAUUUCCGAGGGAUUUCCGAGGAAAGAUGAAUUUCCGAGGAGUUAUUUUCGAGGACUUUUUUCGUCGGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013845548.1 |
|
2.0 | PREDICTED: Brassica napus uncharacterized LOC106404901 (LOC106404901), mRNA | uncharacterized LOC106404901(LOC106404901) | coding protein | psRNATarget |