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BaseInfo

ncRNA ID	novel_bna_miR911
Species	Brassica napus
Class	miRNA
Genome position	ChrC4:51142295-51142409 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR538067
Length	24
Mature sequence(if miRNA)	1 - GUUAAAAGAUAAGAGACUGUAUCU - 24
Stem-loop(if miRNA)	--             A                -        -A     AUAAAUAAGA   AUACGGUCUCUUA CUUUUAACUAAAAAAA CUAAGGGA  GUCUC          A   ||||||||||||| |||||||||||||||| ||||||||  |||||          U   UAUGUCAGAGAAU GAAAAUUGAUUUUUUU GAUUCUCU  CAGAG          A UC             A                A        GA     AAUAUAGAAA
Stem-loop sequence	AUACGGUCUCUUAACUUUUAACUAAAAAAACUAAGGGAAGUCUCAUAAAUAAGAAUAAAAGAUAUAAGAGACAGUCUCUUAGAUUUUUUUAGUUAAAAGAUAAGAGACUGUAUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013885496.1	ncRNA:24   UCUAUGUCAGAGAAUAGAAAAUUG   1   ||||||=||||||||*|||||||| targets:787   AGAUACGGUCUCUUAGCUUUUAAC   810 Target Full Sequence	2.5	PREDICTED: Brassica napus transcriptional regulator TAC1-like (LOC106443956), mRNA	transcriptional regulator TAC1-like(LOC106443956)	coding protein	psRNATarget
XM_013885495.1	ncRNA:24   UCUAUGUCAGAGAAUAGAAAAUUG   1   ||||||=||||||||*|||||||| targets:787   AGAUACGGUCUCUUAGCUUUUAAC   810 Target Full Sequence	2.5	PREDICTED: Brassica napus transcriptional regulator TAC1-like (LOC106443955), mRNA	transcriptional regulator TAC1-like(LOC106443955)	coding protein	psRNATarget
XM_013880507.1	ncRNA:24   UCUAUGUCAGAGAAUAGAAAAUUG   1   ||||||=||||||||*|||||||| targets:787   AGAUACGGUCUCUUAGCUUUUAAC   810 Target Full Sequence	2.5	PREDICTED: Brassica napus transcriptional regulator TAC1-like (LOC106439134), mRNA	transcriptional regulator TAC1-like(LOC106439134)	coding protein	psRNATarget
XM_013866316.1	ncRNA:24   UCUAUGUCAGAGAAUAGAAAAUUG   1   |||*|||||=|||||*|||||||| targets:436   AGAAACAGUUUCUUAACUUUUAAC   459 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106425589 (LOC106425589), mRNA	uncharacterized LOC106425589(LOC106425589)	coding protein	psRNATarget
XM_013822194.1	ncRNA:24   UCUAUGUCAGAGAAUAGAAAAUUG   1   ***||||*||||||=||||||||| targets:114   UAUUACAAUCUCUUGUCUUUUAAC   137 Target Full Sequence	2.5	PREDICTED: Brassica napus probable protein phosphatase 2C 34 (LOC106382212), transcript variant X2, mRNA	probable protein phosphatase 2C 34(LOC106382212)	coding protein	psRNATarget
XM_013837681.1	ncRNA:24   UCUAUGUCAGAGAAUAGAAAAUUG   1   ||*|-||||||||||||||*|||* targets:1682   AGCU-CAGUCUCUUAUCUUGUAAA   1704 Target Full Sequence	2.5	PREDICTED: Brassica napus cytochrome P450 85A2-like (LOC106397123), transcript variant X2, mRNA	cytochrome P450 85A2-like(LOC106397123)	coding protein	psRNATarget
XM_013837680.1	ncRNA:24   UCUAUGUCAGAGAAUAGAAAAUUG   1   ||*|-||||||||||||||*|||* targets:1681   AGCU-CAGUCUCUUAUCUUGUAAA   1703 Target Full Sequence	2.5	PREDICTED: Brassica napus cytochrome P450 85A2-like (LOC106397123), transcript variant X1, mRNA	cytochrome P450 85A2-like(LOC106397123)	coding protein	psRNATarget