ncRNA ID | novel_bna_miR902 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC4:31190436-31190603 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCCAUAAUUAGGUUGUUGGUA - 21 |
Stem-loop(if miRNA) |
--                    A    C                                                  A    U   UCCAUAAUUAGGUUGUUGGU AGCC CGAACCCAGGACCUCACCCUUUAACAGCAUUCCCACUGGACAAGCUGUCA CAAU G   |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||   AGGUAUUAAUCCAACAACCA UCGG GCUUGGGUCCUGGAGUGGGAAAUUGUUGUAAGGGUGACCUGUUCGACAGU GUUA A UG                    C    A                                                  G    U |
Stem-loop sequence | UCCAUAAUUAGGUUGUUGGUAAGCCCCGAACCCAGGACCUCACCCUUUAACAGCAUUCCCACUGGACAAGCUGUCAACAAUUGAUAUUGGUGACAGCUUGUCCAGUGGGAAUGUUGUUAAAGGGUGAGGUCCUGGGUUCGAGGCUCACCAACAACCUAAUUAUGGAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013790150.1 |
|
0.0 | PREDICTED: Brassica napus uncharacterized LOC106350242 (LOC106350242), mRNA | uncharacterized LOC106350242(LOC106350242) | coding protein | psRNATarget | |||||||||
XM_013813606.1 |
|
1.0 | PREDICTED: Brassica napus uncharacterized LOC106373435 (LOC106373435), mRNA | uncharacterized LOC106373435(LOC106373435) | coding protein | psRNATarget |