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BaseInfo

ncRNA ID novel_bna_miR901
Species Brassica napus
Class miRNA
Genome position ChrC1:30485262-30485326 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR538067
Length 20
Mature sequence(if miRNA) 46 - AGAGUGGAGUUCUUAUCGGA - 65
Stem-loop(if miRNA) --  AG  GA       U             A
  AG  UG  GUUCUUA CGGAAGUUAAGAA C
  ||  ||  ||||||| ||||||||||||| A
  UC  AC  CAAGAAU GCCUUCAAUUCUU G
AA  CU  UC       U             U
Stem-loop sequence AGAGUGGAGUUCUUAUCGGAAGUUAAGAAACAGUUUCUUAACUUCCGUUAAGAACCUCAUCCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013811713.1
ncRNA:20   AGGCUAUUCUUGAGGUGAGA   1
  *|||*||||*||||||||||
targets:540   GCCGCUAAGUACUCCACUCU   559

2.5 PREDICTED: Brassica napus homeobox protein knotted-1-like 5 (LOC106371604), mRNA homeobox protein knotted-1-like 5(LOC106371604) coding protein psRNATarget