ncRNA ID | novel_bna_miR901 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC1:30485262-30485326 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR538067 |
Length | 20 |
Mature sequence(if miRNA) | 46 - AGAGUGGAGUUCUUAUCGGA - 65 |
Stem-loop(if miRNA) |
--  AG  GA       U             A   AG  UG  GUUCUUA CGGAAGUUAAGAA C   ||  ||  ||||||| ||||||||||||| A   UC  AC  CAAGAAU GCCUUCAAUUCUU G AA  CU  UC       U             U |
Stem-loop sequence | AGAGUGGAGUUCUUAUCGGAAGUUAAGAAACAGUUUCUUAACUUCCGUUAAGAACCUCAUCCUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013811713.1 |
|
2.5 | PREDICTED: Brassica napus homeobox protein knotted-1-like 5 (LOC106371604), mRNA | homeobox protein knotted-1-like 5(LOC106371604) | coding protein | psRNATarget |