ncRNA ID | ath-miR5022 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr1:22372462-22372578 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 18 - GUCAUGGGGUAUGAUCGAAUG - 38 |
Stem-loop(if miRNA) |
--    -A        A            U             U     CUCAU       G   GUAU  AACUAGAA ACUGUCAUGGGG AUGAUCGAAUGUU GUGUA     UUUUCGU G   ||||  |||||||| |||||||||||| ||||||||||||| |||||     |||||||   UAUA  UUGAUCUU UGAUAGUACCUC UACUAGUUUACAA CGUAU     AGAAGUA A UA    GC        A            U             -     -----       U |
Stem-loop sequence | GUAUAAACUAGAAAACUGUCAUGGGGUAUGAUCGAAUGUUUGUGUACUCAUUUUUCGUGGAUAUGAAGAUAUGCAACAUUUGAUCAUUCUCCAUGAUAGUAUUCUAGUUCGAUAUAU |
1 | PMID:21357774
"MicroRNA activity in the Arabidopsis male germline"; Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD; J Exp Bot. 62:1611-1620(2011). |