ncRNA ID | novel_bna_miR895 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA6:11547768-11547935 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR538067 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AGGAUGAGAUUUUUAGCGGA - 20 |
Stem-loop(if miRNA) |
--       GA                   A                                                    U   AGGAUGA  UUUUUAGCGGAAUAUAAGA UCUGUCUUUUAACUUUUAACUAAAAAAGCUAAGAACCGGCUCUUAAAUAAGA A   |||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   UUCUACU  AAGAAUCGCCUUAUAUUCU AGACAGAGAAUUGAAAAUUGAUUUUUUCGAUUCUUGGCUGAGAAUUUAUUCU U AA       AC                   A                                                    U |
Stem-loop sequence | AGGAUGAGAUUUUUAGCGGAAUAUAAGAAUCUGUCUUUUAACUUUUAACUAAAAAAGCUAAGAACCGGCUCUUAAAUAAGAUAUUUCUUAUUUAAGAGUCGGUUCUUAGCUUUUUUAGUUAAAAGUUAAGAGACAGAAUCUUAUAUUCCGCUAAGAACAUCAUCUUAA |