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BaseInfo

ncRNA ID novel_bna_miR889
Species Brassica napus
Class miRNA
Genome position ChrA2:17608393-17608520 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR538066
Length 27
Mature sequence(if miRNA) 1 - GAGAGAGAGAAAGAGAGAAAGUAGAUC - 27
Stem-loop(if miRNA) GAGAGA  GA               UCUU      A  ------------       UU   -    -   G
      GA  AAGAGAGAAAGUAGA    GUUUGA GG            UUCGGUG  CGG ACGG CGC U
      ||  |||||||||||||||    |||||| ||            |||||||  ||| |||| |||
      CU  UUUUUUCUUUUAUUU    CGAACU CC            AGGCCGC  GCC UGCC GCG G
--GCCA  UC               -CCU      A  UUCUUCUGCCCG       -U   G    U   A
Stem-loop sequence GAGAGAGAGAAAGAGAGAAAGUAGAUCUUGUUUGAAGGUUCGGUGUUCGGACGGCGCGUGAGCGUCCGUGCCGUCGCCGGAGCCCGUCUUCUUCCAUCAAGCUCCUUUAUUUUCUUUUUUCUUCACCG