ncRNA ID | novel_bna_miR889 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA2:17608393-17608520 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR538066 |
Length | 27 |
Mature sequence(if miRNA) | 1 - GAGAGAGAGAAAGAGAGAAAGUAGAUC - 27 |
Stem-loop(if miRNA) |
GAGAGA  GA               UCUU      A  ------------       UU   -    -   G       GA  AAGAGAGAAAGUAGA    GUUUGA GG            UUCGGUG  CGG ACGG CGC U       ||  |||||||||||||||    |||||| ||            |||||||  ||| |||| |||       CU  UUUUUUCUUUUAUUU    CGAACU CC            AGGCCGC  GCC UGCC GCG G --GCCA  UC               -CCU      A  UUCUUCUGCCCG       -U   G    U   A |
Stem-loop sequence | GAGAGAGAGAAAGAGAGAAAGUAGAUCUUGUUUGAAGGUUCGGUGUUCGGACGGCGCGUGAGCGUCCGUGCCGUCGCCGGAGCCCGUCUUCUUCCAUCAAGCUCCUUUAUUUUCUUUUUUCUUCACCG |