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BaseInfo

ncRNA ID	ath-miRf10633-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - UGGCGGUGGAUACUUCUUGAUCGG - NA
Stem-loop(if miRNA)	GA    GUU     G     UAC       G  ---G     GGUAA    UG        U G GUG  UACU   CUGGU GAGGA   UUCACCG CG    AUGAG     GUCU  AUCGGUGG G A |||  ||||   ||||| |||||   ||||||| ||    |||||     ||||  |||||||| | CAU  GUGG   GGCUA UUCUU   AGGUGGC GU    UGCUC     UAGG  UGGCCACU C U    AG    --U     G     CAU       G  GGUA     ----G    --        U A
Stem-loop sequence	GUGGAUACUGUUCUGGUGGAGGAUACUUCACCGGCGGAUGAGGGUAAGUCUUGAUCGGUGGUGGAUACUUCACCGGUGGAUGCUCGUAUGGUGGCGGUGGAUACUUCUUGAUCGGUGGUGGAUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_125307.2	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||||||||| targets:268   CCGAUCAAGAAGUAUCCACCGCCA   291 Target Full Sequence	0.0	Arabidopsis thaliana Proline-rich extensin-like family protein mRNA	Proline-rich extensin-like family protein(AT5G59170)	coding protein	psRNATarget
BT004134.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||||||||| targets:223   CCGAUCAAGAAGUAUCCACCGCCA   246 Target Full Sequence	0.0	Arabidopsis thaliana clone RAFL15-19-F12 (R20711) putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget
BT005019.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||||||||| targets:211   CCGAUCAAGAAGUAUCCACCGCCA   234 Target Full Sequence	0.0	Arabidopsis thaliana clone U20711 putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget
NM_125307.2	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||*|||||| targets:502   CCGAUCAAGAAGUAUCCUCCGCCA   525 Target Full Sequence	1.5	Arabidopsis thaliana Proline-rich extensin-like family protein mRNA	Proline-rich extensin-like family protein(AT5G59170)	coding protein	psRNATarget
NM_125307.2	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||*|||||| targets:619   CCGAUCAAGAAGUAUCCUCCGCCA   642 Target Full Sequence	1.5	Arabidopsis thaliana Proline-rich extensin-like family protein mRNA	Proline-rich extensin-like family protein(AT5G59170)	coding protein	psRNATarget
NM_125307.2	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||*|||||| targets:658   CCGAUCAAGAAGUAUCCUCCGCCA   681 Target Full Sequence	1.5	Arabidopsis thaliana Proline-rich extensin-like family protein mRNA	Proline-rich extensin-like family protein(AT5G59170)	coding protein	psRNATarget
NM_125307.2	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   ||**|||||||||||||*|||||| targets:463   CCUUUCAAGAAGUAUCCUCCGCCA   486 Target Full Sequence	1.5	Arabidopsis thaliana Proline-rich extensin-like family protein mRNA	Proline-rich extensin-like family protein(AT5G59170)	coding protein	psRNATarget
BT004134.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||*|||||| targets:457   CCGAUCAAGAAGUAUCCUCCGCCA   480 Target Full Sequence	1.5	Arabidopsis thaliana clone RAFL15-19-F12 (R20711) putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget
BT004134.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||*|||||| targets:574   CCGAUCAAGAAGUAUCCUCCGCCA   597 Target Full Sequence	1.5	Arabidopsis thaliana clone RAFL15-19-F12 (R20711) putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget
BT004134.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||*|||||| targets:613   CCGAUCAAGAAGUAUCCUCCGCCA   636 Target Full Sequence	1.5	Arabidopsis thaliana clone RAFL15-19-F12 (R20711) putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget
BT004134.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   ||**|||||||||||||*|||||| targets:418   CCUUUCAAGAAGUAUCCUCCGCCA   441 Target Full Sequence	1.5	Arabidopsis thaliana clone RAFL15-19-F12 (R20711) putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget
BT005019.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||*|||||| targets:445   CCGAUCAAGAAGUAUCCUCCGCCA   468 Target Full Sequence	1.5	Arabidopsis thaliana clone U20711 putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget
BT005019.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||*|||||| targets:562   CCGAUCAAGAAGUAUCCUCCGCCA   585 Target Full Sequence	1.5	Arabidopsis thaliana clone U20711 putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget
BT005019.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   |||||||||||||||||*|||||| targets:601   CCGAUCAAGAAGUAUCCUCCGCCA   624 Target Full Sequence	1.5	Arabidopsis thaliana clone U20711 putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget
BT005019.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   ||**|||||||||||||*|||||| targets:406   CCUUUCAAGAAGUAUCCUCCGCCA   429 Target Full Sequence	1.5	Arabidopsis thaliana clone U20711 putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget
NM_125307.2	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   ||*||=|||||||||||*|||||| targets:679   CCAAUUAAGAAGUAUCCUCCGCCA   702 Target Full Sequence	2.5	Arabidopsis thaliana Proline-rich extensin-like family protein mRNA	Proline-rich extensin-like family protein(AT5G59170)	coding protein	psRNATarget
BT004134.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   ||*||=|||||||||||*|||||| targets:634   CCAAUUAAGAAGUAUCCUCCGCCA   657 Target Full Sequence	2.5	Arabidopsis thaliana clone RAFL15-19-F12 (R20711) putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget
BT005019.1	ncRNA:24   GGCUAGUUCUUCAUAGGUGGCGGU   1   ||*||=|||||||||||*|||||| targets:622   CCAAUUAAGAAGUAUCCUCCGCCA   645 Target Full Sequence	2.5	Arabidopsis thaliana clone U20711 putative cell wall protein (At5g59170) mRNA, complete cds	NA	coding protein	psRNATarget