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BaseInfo

ncRNA ID novel_bna_miR873
Species Brassica napus
Class miRNA
Genome position ChrC2:16805101-16805142 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR538066
Length 20
Mature sequence(if miRNA) 23 - GCUAGUAUGGUAGAAAGAGA - 42
Stem-loop(if miRNA) --                  G
  GCUAGUAUGGUAGAAAGA A
  ||||||||||||||||||
  CGAUCAUACCAUCUUUCU U
AC                  C
Stem-loop sequence GCUAGUAUGGUAGAAAGAGAUCUCUUUCUACCAUACUAGCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013796013.1
ncRNA:20   AGAGAAAGAUGGUAUGAUCG   1
  |=||||*||||||||||||*
targets:1348   UUUCUUACUACCAUACUAGG   1367

3.0 PREDICTED: Brassica napus uncharacterized LOC106356220 (LOC106356220), mRNA uncharacterized LOC106356220(LOC106356220) coding protein psRNATarget