ncRNA ID | novel_bna_miR863 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA5:31144281-31144405 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR538066 |
Length | 20 |
Mature sequence(if miRNA) | 106 - GGAUAACAAAGUUGGAGACC - 125 |
Stem-loop(if miRNA) |
-UU    UACACUGUAUUUAAUUCUAUUCCAGUUUGAUUCUUUGGUUCUAGAGGUUUAAAAU    UGCA                                                       C    ||||    GAGG                                                       U CCA    UUGAAACAAUAGGCUUGGAUUGGCUUUAGCUUAACAUGAAAGAUUUAUAGAUUUG |
Stem-loop sequence | UUUGCAUACACUGUAUUUAAUUCUAUUCCAGUUUGAUUCUUUGGUUCUAGAGGUUUAAAAUCUGUUUAGAUAUUUAGAAAGUACAAUUCGAUUUCGGUUAGGUUCGGAUAACAAAGUUGGAGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013869695.1 |
|
2.5 | PREDICTED: Brassica napus probable Ufm1-specific protease (LOC106428951), mRNA | probable Ufm1-specific protease(LOC106428951) | coding protein | psRNATarget | |||||||||
XM_013869401.1 |
|
2.5 | PREDICTED: Brassica napus probable Ufm1-specific protease (LOC106428658), mRNA | probable Ufm1-specific protease(LOC106428658) | coding protein | psRNATarget |