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BaseInfo

ncRNA ID novel_bna_miR863
Species Brassica napus
Class miRNA
Genome position ChrA5:31144281-31144405 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR538066
Length 20
Mature sequence(if miRNA) 106 - GGAUAACAAAGUUGGAGACC - 125
Stem-loop(if miRNA) -UU    UACACUGUAUUUAAUUCUAUUCCAGUUUGAUUCUUUGGUUCUAGAGGUUUAAAAU
   UGCA                                                       C
   ||||
   GAGG                                                       U
CCA    UUGAAACAAUAGGCUUGGAUUGGCUUUAGCUUAACAUGAAAGAUUUAUAGAUUUG
Stem-loop sequence UUUGCAUACACUGUAUUUAAUUCUAUUCCAGUUUGAUUCUUUGGUUCUAGAGGUUUAAAAUCUGUUUAGAUAUUUAGAAAGUACAAUUCGAUUUCGGUUAGGUUCGGAUAACAAAGUUGGAGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013869695.1
ncRNA:20   CCAGAGGUUGAAACAAUAGG   1
  *|||||=|||||*|||||||
targets:1026   AGUCUCUAACUUAGUUAUCC   1045

2.5 PREDICTED: Brassica napus probable Ufm1-specific protease (LOC106428951), mRNA probable Ufm1-specific protease(LOC106428951) coding protein psRNATarget
XM_013869401.1
ncRNA:20   CCAGAGGUUGAAACAAUAGG   1
  ||||||*|||||*|||||||
targets:1039   GGUCUCAAACUUAGUUAUCC   1058

2.5 PREDICTED: Brassica napus probable Ufm1-specific protease (LOC106428658), mRNA probable Ufm1-specific protease(LOC106428658) coding protein psRNATarget