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BaseInfo

ncRNA ID	novel_bna_miR861
Species	Brassica napus
Class	miRNA
Genome position	ChrC4:47944093-47944227 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363495
Length	24
Mature sequence(if miRNA)	1 - AAACGGAUUGAUCGAUGGAUAUAU - 24
Stem-loop(if miRNA)	--                        -           A                  C         A   AUAUCCAUCGAUCGAUCCGUUUAU AAAAAACGUUC GAAUAUACCGAGGGACAU UUCCUCGGA U   |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||   UAUAGGUAGCUAGUUAGGCAAAUA UUUUUUGCAAG CUUAUAUGGCUUCCUGUA AAGGAGCCU A UA                        G           C                  C         U
Stem-loop sequence	AUAUCCAUCGAUCGAUCCGUUUAUAAAAAACGUUCAGAAUAUACCGAGGGACAUCUUCCUCGGAAUAUUCCGAGGAACAUGUCCUUCGGUAUAUUCCGAACGUUUUUUGAUAAACGGAUUGAUCGAUGGAUAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013893865.1	ncRNA:24   UAUAUAGGUAGCUAGUUAGGCAAA   1   ||=-|*||||*||||||||||||| targets:768   AUG-ACCCAUGGAUCAAUCCGUUU   790 Target Full Sequence	2.0	PREDICTED: Brassica napus probable carboxylesterase 2 (LOC106451883), mRNA	probable carboxylesterase 2(LOC106451883)	coding protein	psRNATarget
XM_013786558.1	ncRNA:24   UAUAUAGGUAGCUAGUUAGGCAAA   1   =*||-||||*||||||=||||||| targets:56   GCAU-UCCACCGAUCAGUCCGUUU   78 Target Full Sequence	2.5	PREDICTED: Brassica napus HVA22-like protein h (LOC106347066), transcript variant X2, mRNA	HVA22-like protein h(LOC106347066)	coding protein	psRNATarget
XM_013786557.1	ncRNA:24   UAUAUAGGUAGCUAGUUAGGCAAA   1   =*||-||||*||||||=||||||| targets:111   GCAU-UCCACCGAUCAGUCCGUUU   133 Target Full Sequence	2.5	PREDICTED: Brassica napus HVA22-like protein h (LOC106347066), transcript variant X1, mRNA	HVA22-like protein h(LOC106347066)	coding protein	psRNATarget