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BaseInfo

ncRNA ID	novel_bna_miR850
Species	Brassica napus
Class	miRNA
Genome position	ChrC7:16690865-16691000 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537857;SRR538066;SRR538151
Length	20
Mature sequence(if miRNA)	1 - AGGACGAGGUUCUUAGCGGA - 20
Stem-loop(if miRNA)	--AGGAC A                        AA                      --         C        G GGUUCUUAGCGGAAUUUAAGAAAC  UUUCUUAACUUUUAACUAAAAA  AGUUAAGAA C        | ||||||||||||||||||||||||  ||||||||||||||||||||||  |||||||||        C CCAAGAAUCGCCUUAAAUUCUUUG  AAAGAAUUGAAAAUUGAUUUUU  UCAAUUCUU G AAUCUCA C                        AC                      UU         G
Stem-loop sequence	AGGACGAGGUUCUUAGCGGAAUUUAAGAAACAAUUUCUUAACUUUUAACUAAAAAAGUUAAGAACCGGUUCUUAACUUUUUUUUAGUUAAAAGUUAAGAAACAGUUUCUUAAAUUCCGCUAAGAACCCCACUCUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013799688.1	ncRNA:20   AGGCGAUUCUUGGAGCAGGA   1   *||||*||||||||||*||| targets:282   GCCGCCAAGAACCUCGCCCU   301 Target Full Sequence	2.5	PREDICTED: Brassica napus cyclin-dependent kinase inhibitor 5 (LOC106360089), mRNA	cyclin-dependent kinase inhibitor 5(LOC106360089)	coding protein	psRNATarget
XM_013840735.1	ncRNA:20   AGGCGAUUCUUGGAGCAGGA   1   *||*=|=||||||||||||| targets:3217   GCCAUUGAGAACCUCGUCCU   3236 Target Full Sequence	3.0	PREDICTED: Brassica napus protein NETWORKED 1D-like (LOC106400363), mRNA	protein NETWORKED 1D-like(LOC106400363)	coding protein	psRNATarget
XM_013863773.1	ncRNA:20   AGGCGAUUCUUGGAGCAGGA   1   *||*=|=||||||||||||| targets:3597   GCCAUUGAGAACCUCGUCCU   3616 Target Full Sequence	3.0	PREDICTED: Brassica napus protein NETWORKED 1D-like (LOC106422990), transcript variant X1, mRNA	protein NETWORKED 1D-like(LOC106422990)	coding protein	psRNATarget
XM_013863774.1	ncRNA:20   AGGCGAUUCUUGGAGCAGGA   1   *||*=|=||||||||||||| targets:3597   GCCAUUGAGAACCUCGUCCU   3616 Target Full Sequence	3.0	PREDICTED: Brassica napus protein NETWORKED 1D-like (LOC106422990), transcript variant X2, mRNA	protein NETWORKED 1D-like(LOC106422990)	coding protein	psRNATarget