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BaseInfo

ncRNA ID	ath-miRf10629-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - ACCGGUAUCUGGUCCGGUUUC - NA
Stem-loop(if miRNA)	U      A            --U     CCUG  GA    GAA   UU A  GUUUUA AAACCGGACCGG   CCGGU    CA  CCAA   UCG  C U  |||||| ||||||||||||   |||||    ||  ||||   |||  |  CAAAAU UUUGGCCUGGUC   GGCCA    GU  GGUU   AGU  G G A      C            UAU     ---A  AG    -AA   CG U
Stem-loop sequence	UGUUUUAAAAACCGGACCGGUCCGGUCCUGCAGACCAAGAAUCGUUCAUGUGGCUGAAAUUGGGAUGAACCGGUAUCUGGUCCGGUUUCUAAAACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001203574.1	ncRNA:21   CUUUGGCCUGGUCUAUGGCCA   1   ||||||||||||||||||||| targets:11   GAAACCGGACCAGAUACCGGU   31 Target Full Sequence	0.0	Arabidopsis thaliana DHHC-type zinc finger family protein mRNA	DHHC-type zinc finger family protein(AT5G50020)	coding protein	psRNATarget
NM_001344870.1	ncRNA:21   CUUUGGCCUGGUCUAUGGCCA   1   ||||||||||||||||||||| targets:14   GAAACCGGACCAGAUACCGGU   34 Target Full Sequence	0.0	Arabidopsis thaliana DHHC-type zinc finger family protein mRNA	DHHC-type zinc finger family protein(AT5G50020)	coding protein	psRNATarget
BT015425.1	ncRNA:21   CUUUGGCCUGGUCUAUGGCCA   1   *=|||||*||||*|||||||| targets:813   UGAACCGAACCAAAUACCGGU   833 Target Full Sequence	2.5	Arabidopsis thaliana At3g09580 mRNA sequence	NA	coding protein	psRNATarget
BX823356.1	ncRNA:21   CUUUGGCCUGGUCUAUGGCCA   1   *=|||||*||||*|||||||| targets:943   UGAACCGAACCAAAUACCGGU   963 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS26ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY117185.1	ncRNA:21   CUUUGGCCUGGUCUAUGGCCA   1   *=|||||*||||*|||||||| targets:999   UGAACCGAACCAAAUACCGGU   1019 Target Full Sequence	2.5	Arabidopsis thaliana putative oxidoreductase (At3g09580) mRNA, complete cds	NA	coding protein	psRNATarget
BX823845.1	ncRNA:21   CUUUGGCCUGGUCUAUGGCCA   1   *=|||||*||||*|||||||| targets:998   UGAACCGAACCAAAUACCGGU   1018 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS82ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY089020.1	ncRNA:21   CUUUGGCCUGGUCUAUGGCCA   1   *=|||||*||||*|||||||| targets:1010   UGAACCGAACCAAAUACCGGU   1030 Target Full Sequence	2.5	Arabidopsis thaliana clone 17350 mRNA, complete sequence	NA	coding protein	psRNATarget
AY064000.1	ncRNA:21   CUUUGGCCUGGUCUAUGGCCA   1   *=|||||*||||*|||||||| targets:1029   UGAACCGAACCAAAUACCGGU   1049 Target Full Sequence	2.5	Arabidopsis thaliana putative oxidoreductase (At3g09580) mRNA, complete cds	NA	coding protein	psRNATarget
NM_111792.3	ncRNA:21   CUUUGGCCUGGUCUAUGGCCA   1   *=|||||*||||*|||||||| targets:1409   UGAACCGAACCAAAUACCGGU   1429 Target Full Sequence	2.5	Arabidopsis thaliana FAD/NAD(P)-binding oxidoreductase family protein mRNA	FAD/NAD(P)-binding oxidoreductase family protein(AT3G09580)	coding protein	psRNATarget