ncRNA ID | novel_bna_miR823 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC2:45283026-45283086 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537857 |
Length | 22 |
Mature sequence(if miRNA) | 40 - AUCUUGAUUUUACGGAUUCGGC - 61 |
Stem-loop(if miRNA) |
--    -U       CGG      CGGAUCC   AUCU  GAUUUUA   AUUCGG       A   ||||  |||||||   ||||||       G   UGGA  UUAAAGU   UAAGCC       A CC    UU       -AA      UAAAUAU |
Stem-loop sequence | AUCUUGAUUUUACGGAUUCGGCGGAUCCAGAUAUAAAUCCGAAUAAUGAAAUUUUAGGUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013817336.1 |
|
1.5 | PREDICTED: Brassica napus 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like (LOC106377158), mRNA | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like(LOC106377158) | coding protein | psRNATarget |