| ncRNA ID | novel_bna_miR821 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrC1:11972524-11972726 [+] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR537857;SRR538066;SRR538067 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - AGAGUGGAGUUCUUAACGGAA - 21 |
| Stem-loop(if miRNA) |
-- A C C AACU A A ACCAGCUCUUAAA AA AGAGUGG GUU UUAA GGAAUAUAAAAAA UCUCUUAACUUUUAA UAAAAAAGUUAAGAACC GCUCUUAAAUAAGA UAAG C ||||||| ||| |||| ||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||| |||| UCUCACC CAA AAUU CCUUAUAUUUUUU AGAGAAUUGAAAAUU AUUUUUUCAAUUCUUGG CGAGAAUUUAUUCU AUUC C AA C A A -GGC G C --AUAAAUUUUCA GA |
| Stem-loop sequence | AGAGUGGAGUUCUUAACGGAAUAUAAAAAAAACUUCUCUUAACUUUUAAAUAAAAAAGUUAAGAACCAGCUCUUAAAUAAGAACCAGCUCUUAAAUAAGAACCAGCUUAACUUUUAAAUAUCUUAUUUAAGAGCCGGUUCUUAACUUUUUUAGUUAAAAGUUAAGAGACGGUUUUUUAUAUUCCAUUAAAAACCCCACUCUAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013797295.1 |
|
2.5 | PREDICTED: Brassica napus uncharacterized LOC106357624 (LOC106357624), mRNA | uncharacterized LOC106357624(BNAA07G36090D) | coding protein | psRNATarget | |||||||||
| XM_013831776.1 |
|
2.5 | PREDICTED: Brassica napus uncharacterized LOC106391181 (LOC106391181), mRNA | uncharacterized LOC106391181(LOC106391181) | coding protein | psRNATarget | |||||||||
| XM_013811713.1 |
|
2.5 | PREDICTED: Brassica napus homeobox protein knotted-1-like 5 (LOC106371604), mRNA | homeobox protein knotted-1-like 5(LOC106371604) | coding protein | psRNATarget |