ncRNA ID | novel_bna_miR820 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC1:1283522-1283677 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537857;SRR538067 |
Length | 20 |
Mature sequence(if miRNA) | 137 - AGAGUGGGAUUCUUAGCGGA - 156 |
Stem-loop(if miRNA) |
--  AG   GA      G  G  A       ------                      -                   GU   AG  UGG  UUCUUA CG AA UUAAGAA      UUUUAACUUUUAACUAAAAAAA CUAAGAACCGGUUCUUAAA  C   ||  |||  |||||| || || |||||||      |||||||||||||||||||||| |||||||||||||||||||  C   UC  ACU  AAGAAU GC UU AAUUCUU      AGAAUUGAAAAUUGAUUUUUUU GAUUCUUGGCCAAGAAUUU  U AU  CU   UC      A  A  C       UGACAA                      C                   AU |
Stem-loop sequence | AGAGUGGGAUUCUUAGCGGAAAUUAAGAAUUUUAACUUUUAACUAAAAAAACUAAGAACCGGUUCUUAAAGUCCUUAUUUAAGAACCGGUUCUUAGCUUUUUUUAGUUAAAAGUUAAGAAACAGUUUCUUAACUUACGAUAAGAACUUCAUCCUUA |