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BaseInfo

ncRNA ID novel_bna_miR820
Species Brassica napus
Class miRNA
Genome position ChrC1:1283522-1283677 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537857;SRR538067
Length 20
Mature sequence(if miRNA) 137 - AGAGUGGGAUUCUUAGCGGA - 156
Stem-loop(if miRNA) --  AG   GA      G  G  A       ------                      -                   GU
  AG  UGG  UUCUUA CG AA UUAAGAA      UUUUAACUUUUAACUAAAAAAA CUAAGAACCGGUUCUUAAA  C
  ||  |||  |||||| || || |||||||      |||||||||||||||||||||| |||||||||||||||||||  C
  UC  ACU  AAGAAU GC UU AAUUCUU      AGAAUUGAAAAUUGAUUUUUUU GAUUCUUGGCCAAGAAUUU  U
AU  CU   UC      A  A  C       UGACAA                      C                   AU
Stem-loop sequence AGAGUGGGAUUCUUAGCGGAAAUUAAGAAUUUUAACUUUUAACUAAAAAAACUAAGAACCGGUUCUUAAAGUCCUUAUUUAAGAACCGGUUCUUAGCUUUUUUUAGUUAAAAGUUAAGAAACAGUUUCUUAACUUACGAUAAGAACUUCAUCCUUA