ncRNA ID | ath-miRf10627-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - AUUGUUGUCCGAGUCGUCAU - NA |
Stem-loop(if miRNA) |
    U               C           G   UA AAGA GCAAAAUGACGACUC GACAACAAUAA UAU  G |||| ||||||||||||||| ||||||||||| |||  U UUCU CGUUUUACUGCUGAG CUGUUGUUAUU AUG  U     U               C           -   UU |
Stem-loop sequence | AAGAUGCAAAAUGACGACUCCGACAACAAUAAGUAUUAGUUUUGUAUUAUUGUUGUCCGAGUCGUCAUUUUGCUUCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Z50752.1 |
|
2.5 | A.thaliana mRNA for sugar transporter | NA | coding protein | psRNATarget | |||||||||
NM_001332471.1 |
|
2.5 | Arabidopsis thaliana tonoplast monosaccharide transporter1 (TMT1), mRNA | tonoplast monosaccharide transporter1(TMT1) | coding protein | psRNATarget | |||||||||
NM_101937.6 |
|
2.5 | Arabidopsis thaliana tonoplast monosaccharide transporter1 (TMT1), mRNA | tonoplast monosaccharide transporter1(TMT1) | coding protein | psRNATarget |