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BaseInfo

ncRNA ID novel_bna_miR814
Species Brassica napus
Class miRNA
Genome position ChrA9:28952589-28952657 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537857;SRR538066
Length 22
Mature sequence(if miRNA) 48 - AACUAAAAAGACUAAGAACCGG - 69
Stem-loop(if miRNA) --          AC                   A
  AACUAAAAAG  UAAGAACCGGUUUUUAAAU A
  ||||||||||  ||||||||||||||||||| A
  UUGAUUUUUU  AUUUUUGGCCAAGAAUUUA G
AA          CA                   A
Stem-loop sequence AACUAAAAAGACUAAGAACCGGUUUUUAAAUAAAGAAUUUAAGAACCGGUUUUUAACUUUUUUAGUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013816869.1
ncRNA:22   GGCCAAGAAUCAGAAAAAUCAA   1
  ==*|||=|||||*|||||||||
targets:1690   UUAGUUUUUAGUGUUUUUAGUU   1711

2.5 PREDICTED: Brassica napus putative ubiquitin-conjugating enzyme E2 38 (LOC106376752), transcript variant X1, mRNA putative ubiquitin-conjugating enzyme E2 38(LOC106376752) coding protein psRNATarget
XM_013816870.1
ncRNA:22   GGCCAAGAAUCAGAAAAAUCAA   1
  ==*|||=|||||*|||||||||
targets:1688   UUAGUUUUUAGUGUUUUUAGUU   1709

2.5 PREDICTED: Brassica napus putative ubiquitin-conjugating enzyme E2 38 (LOC106376752), transcript variant X2, mRNA putative ubiquitin-conjugating enzyme E2 38(LOC106376752) coding protein psRNATarget