ncRNA ID | novel_bna_miR814 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA9:28952589-28952657 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR537857;SRR538066 |
Length | 22 |
Mature sequence(if miRNA) | 48 - AACUAAAAAGACUAAGAACCGG - 69 |
Stem-loop(if miRNA) |
--          AC                   A   AACUAAAAAG  UAAGAACCGGUUUUUAAAU A   ||||||||||  ||||||||||||||||||| A   UUGAUUUUUU  AUUUUUGGCCAAGAAUUUA G AA          CA                   A |
Stem-loop sequence | AACUAAAAAGACUAAGAACCGGUUUUUAAAUAAAGAAUUUAAGAACCGGUUUUUAACUUUUUUAGUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013816869.1 |
|
2.5 | PREDICTED: Brassica napus putative ubiquitin-conjugating enzyme E2 38 (LOC106376752), transcript variant X1, mRNA | putative ubiquitin-conjugating enzyme E2 38(LOC106376752) | coding protein | psRNATarget | |||||||||
XM_013816870.1 |
|
2.5 | PREDICTED: Brassica napus putative ubiquitin-conjugating enzyme E2 38 (LOC106376752), transcript variant X2, mRNA | putative ubiquitin-conjugating enzyme E2 38(LOC106376752) | coding protein | psRNATarget |