Search result

BaseInfo

ncRNA ID novel_bna_miR812
Species Brassica napus
Class miRNA
Genome position ChrA8:5767726-5767886 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR537857
Length 22
Mature sequence(if miRNA) 1 - AGGAUGGGGUUCUUAGCGGAAG - 22
Stem-loop(if miRNA) --   AU                         C          C                                  UA
  AGG  GGGGUUCUUAGCGGAAGUUAAGAAA UGUUUCUUAA UUUUAACUAAAAAAGCUAAGAACCGGUUCUUAAA  A
  |||  ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||  A
  UCU  CUUCAAGAAUUGCCUUCAAUUUUUU ACAAAGAAUU AAAAUUGAUUUUUUCGAUUCUUGGCCAAGAAUUU  G
AA   CU                         U          A                                  CA
Stem-loop sequence AGGAUGGGGUUCUUAGCGGAAGUUAAGAAACUGUUUCUUAACUUUUAACUAAAAAAGCUAAGAACCGGUUCUUAAAUAAAGACUUUAAGAACCGGUUCUUAGCUUUUUUAGUUAAAAAUUAAGAAACAUUUUUUUAACUUCCGUUAAGAACUUCUCUCUAA