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BaseInfo

ncRNA ID	novel_bna_miR809
Species	Brassica napus
Class	miRNA
Genome position	ChrA6:41147314-41147445 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR537857
Length	21
Mature sequence(if miRNA)	112 - AUCGGAAUAUAAGAACUCGUC - 132
Stem-loop(if miRNA)	--                      C                   U      -CAA         UA   AUCGGAAUAUAAGAACUCGUCU UUAACUUUUAACUAAAAAA UAAGAA    GUUCUUAAA  A   |||||||||||||||||||||| ||||||||||||||||||| ||||||    |||||||||  G   UAGCCUUAUAUUCUUGGGCAGA AAUUGAAAAUUGAUUUUUU AUUUUU    CGAGAAUUU  A AA                      A                   C      UAGC         UG
Stem-loop sequence	AUCGGAAUAUAAGAACUCGUCUCUUAACUUUUAACUAAAAAAUUAAGAACAAGUUCUUAAAUAAGAGUUUUAAGAGCCGAUUUUUUACUUUUUUAGUUAAAAGUUAAAAGACGGGUUCUUAUAUUCCGAUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013830748.1	ncRNA:21   CUGCUCAAGAAUAUAAGGCUA   1   ||||=|||||||||||||||| targets:24   GACGGGUUCUUAUAUUCCGAU   44 Target Full Sequence	1.0	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X2, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013830747.1	ncRNA:21   CUGCUCAAGAAUAUAAGGCUA   1   ||||=|||||||||||||||| targets:24   GACGGGUUCUUAUAUUCCGAU   44 Target Full Sequence	1.0	PREDICTED: Brassica napus CBS domain-containing protein CBSCBSPB2-like (LOC106390313), transcript variant X1, mRNA	CBS domain-containing protein CBSCBSPB2-like(LOC106390313)	coding protein	psRNATarget
XM_013810588.1	ncRNA:21   CUGCUCAAGAAUAUAAGGCUA   1   |||||||||||||||||||** targets:1251   GACGAGUUCUUAUAUUCCGCC   1271 Target Full Sequence	2.5	PREDICTED: Brassica napus putative auxin efflux carrier component 8 (LOC106370582), mRNA	putative auxin efflux carrier component 8(LOC106370582)	coding protein	psRNATarget