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BaseInfo

ncRNA ID novel_bna_miR808
Species Brassica napus
Class miRNA
Genome position ChrC3:4605926-4605971 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 22
Mature sequence(if miRNA) 25 - UAAAAGUUAAAAGACGGUUUCU - 46
Stem-loop(if miRNA) --      GUUC         UU
  GAGCCG    UUAGCUUUU  A
  ||||||    |||||||||
  UUUGGC    AAUUGAAAA  G
UC      AGAA         UU
Stem-loop sequence GAGCCGGUUCUUAGCUUUUUUAGUUAAAAGUUAAAAGACGGUUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013811892.1
ncRNA:22   UCUUUGGCAGAAAAUUGAAAAU   1
  **|||||*||||||||||||*|
targets:2136   UUAAACCAUCUUUUAACUUUGA   2157

2.5 PREDICTED: Brassica napus probable glutamate carboxypeptidase 2 (LOC106371788), mRNA probable glutamate carboxypeptidase 2(LOC106371788) coding protein psRNATarget