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BaseInfo

ncRNA ID	ath-miRf10626-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UCGACCUGGGGGUCGAGUGA - NA
Stem-loop(if miRNA)	U   GG GA                A     --GUG   UCGAGUGAUG  GAU  U  UACUCGACUUCCAGGU GAGUG     UGA          G  |||  |  |||||||||||||||| |||||     |||          U  CUA  G  GUGAGCUGGGGGUCCA CUCAC     UCG          C G   GU AA                G     AGAAG   AGGUGGUGGA
Stem-loop sequence	UGAUGGUGAUACUCGACUUCCAGGUAGAGUGGUGUGAUCGAGUGAUGGUCAGGUGGUGGAGCUGAAGACACUCGACCUGGGGGUCGAGUGAAGUGAUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_103391.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *||||||||||||||||||| targets:1104   CCACUCGACCCCCAGGUCGA   1123 Target Full Sequence	0.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT015478.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *=|||||||||||||||||| targets:136   AUACUCGACCCCCAGGUCGA   155 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *=|||||||||||||||||| targets:136   AUACUCGACCCCCAGGUCGA   155 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *|||||||||||*||||||| targets:1059   GCACUCGACCCCGAGGUCGA   1078 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT015478.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *||||||||||||*|||||| targets:230   CCACUCGACCCCCUGGUCGA   249 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *||||||||||||*|||||| targets:230   CCACUCGACCCCCUGGUCGA   249 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   |||||||||||||*|||||| targets:1571   UCACUCGACCCCCUGGUCGA   1590 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   ||||||||||||*||||||| targets:1617   UCACUCGACCCCGAGGUCGA   1636 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *||||||||||||*|||||| targets:124   CCACUCGACCCCCUGGUCGA   143 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *||||||||||||*|||||| targets:499   CCACUCGACCCCCUGGUCGA   518 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *||||||||||||*|||||| targets:499   CCACUCGACCCCCUGGUCGA   518 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *||||||||||||*|||||| targets:90   CCACUCGACCCCCUGGUCGA   109 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *|||||||||*||||||||| targets:449   CCACUCGACCACCAGGUCGA   468 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   *|||||||||||*||||||| targets:854   CCACUCGACCCCGAGGUCGA   873 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
BT025674.1	ncRNA:20   AG-UGAGCUGGGGGUCCAGCU   1   ||-|||||||||||||||||| targets:186   UCUACUCGACCCCCAGGUCGA   206 Target Full Sequence	2.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT025674.1	ncRNA:20   AGUGAGCUGGGGGUCCAGCU   1   |=|||||||||||*|||||| targets:308   UUACUCGACCCCCUGGUCGA   327 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget