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BaseInfo

ncRNA ID	novel_bna_miR803
Species	Brassica napus
Class	miRNA
Genome position	ChrC3:1671894-1672021 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR1363495
Length	23
Mature sequence(if miRNA)	106 - GGAUCGAAUCCAGAUCUCGGAUA - 128
Stem-loop(if miRNA)	--   -     C        C    ACG     AACAUUUUACU           G      CCUC     A   UCC AGAUC GGAUUCGG UUUG   GAUCC           AUCCGGAUCCG AUUCGG    UCCGG U   ||| ||||| |||||||| ||||   |||||           ||||||||||| ||||||    |||||   AGG UCUAG CCUAAGCU AGGC   CUAGG           UAGGCCUAGGC UAGGCU    AGGCC A AU   C     A        -    --A     ----------C           -      -UUU     U
Stem-loop sequence	UCCAGAUCCGGAUUCGGCUUUGACGGAUCCAACAUUUUACUAUCCGGAUCCGGAUUCGGCCUCUCCGGAUAUCCGGAUUUUCGGAUCGGAUCCGGAUCGGAUCACGGAUCGAAUCCAGAUCUCGGAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013870893.1	ncRNA:23   AUAGGCUCUAGACCUAAGCUAGG   1   *||=|**|||||||||||||||= targets:206   GAUUCUUGAUCUGGAUUCGAUCU   228 Target Full Sequence	3.0	PREDICTED: Brassica napus protein transport protein SEC23-like (LOC106430118), mRNA	protein transport protein SEC23-like(LOC106430118)	coding protein	psRNATarget
XM_013867370.1	ncRNA:23   AUAGGCUCUAGACCUAAGCUAGG   1   *||=|**|||||||||||||||= targets:216   GAUUCUUGAUCUGGAUUCGAUCU   238 Target Full Sequence	3.0	PREDICTED: Brassica napus protein transport protein SEC23-like (LOC106426653), mRNA	protein transport protein SEC23-like(LOC106426653)	coding protein	psRNATarget
XM_013824762.1	ncRNA:23   AUAGGCUCUAGACCUAAGCUAGG   1   *=****=|||||||||||||||| targets:335   CGCAAAGGAUCUGGAUUCGAUCC   357 Target Full Sequence	3.0	PREDICTED: Brassica napus ATPase family AAA domain-containing protein 3-like (LOC106384852), mRNA	ATPase family AAA domain-containing protein 3-like(LOC106384852)	coding protein	psRNATarget