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BaseInfo

ncRNA ID	ath-miRf10625-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GAAGACUCUGAAGCUCGACA - NA
Stem-loop(if miRNA)	GAAUAGAU            UC    UU UG     G G GAUGUCGAGU        GGAGUCUUCUUU  UUCC  G  CUCGA U U ||||||||||        ||||||||||||  ||||  |  ||||| | CUACAGCUCG        UCUCAGAAGAGG  AAGG  C  GAGUU A C           -----AAG            -U    -- GU     G U
Stem-loop sequence	GAUGUCGAGUGAAUAGAUGGAGUCUUCUUUUCUUCCUUGUGCUCGAGUGUCUAGUUGAGUGCGGAAUGGAGAAGACUCUGAAGCUCGACAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_124056.2	ncRNA:20   ACAGCUCGAAGUCUCAGAAG   1   |*|=|||||||||||||||| targets:408   UUUUGAGCUUCAGAGUCUUC   427 Target Full Sequence	2.0	Arabidopsis thaliana phosphatidylinositol-glycan biosynthesis class X-like protein partial mRNA	phosphatidylinositol-glycan biosynthesis class X-like protein(AT5G46850)	coding protein	psRNATarget
NM_001203553.2	ncRNA:20   ACAGCUCGAAGUCUCAGAAG   1   |*|=|||||||||||||||| targets:550   UUUUGAGCUUCAGAGUCUUC   569 Target Full Sequence	2.0	Arabidopsis thaliana phosphatidylinositol-glycan biosynthesis class X-like protein mRNA	phosphatidylinositol-glycan biosynthesis class X-like protein(AT5G46850)	coding protein	psRNATarget
NM_001203552.1	ncRNA:20   ACAGCUCGAAGUCUCAGAAG   1   |*|=|||||||||||||||| targets:601   UUUUGAGCUUCAGAGUCUUC   620 Target Full Sequence	2.0	Arabidopsis thaliana phosphatidylinositol-glycan biosynthesis class X-like protein mRNA	phosphatidylinositol-glycan biosynthesis class X-like protein(AT5G46850)	coding protein	psRNATarget
NM_001203743.2	ncRNA:20   ACAGCUCGAAGUCUCAGAAG   1   ||||*||||||*|||||||| targets:2548   UGUCUAGCUUCCGAGUCUUC   2567 Target Full Sequence	2.5	Arabidopsis thaliana calcium-dependent protein kinase 23 (CPK23), mRNA	calcium-dependent protein kinase 23(CPK23)	coding protein	psRNATarget
BX833676.1	ncRNA:20   ACAGCUCGAAGUCUCAGAAG   1   |*|=|*|||||||||||||| targets:471   UUUUGCGCUUCAGAGUCUUC   490 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL6ZH04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget